ACCUMULATIONS AND DEPOSITS
Ed Friedlander, M.D., Pathologist
scalpel_blade@yahoo.com

Cyberfriends: The help you're looking for is probably here.

Welcome to Ed's Pathology Notes, placed here originally for the convenience of medical students at my school. You need to check the accuracy of any information, from any source, against other credible sources. I cannot diagnose or treat over the web, I cannot comment on the health care you have already received, and these notes cannot substitute for your own doctor's care. I am good at helping people find resources and answers. If you need me, send me an E-mail at scalpel_blade@yahoo.com Your confidentiality is completely respected.

DoctorGeorge.com is a larger, full-time service. There is also a fee site at myphysicians.com, and another at www.afraidtoask.com.

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Freely have you received, give freely With one of four large boxes of "Pathguy" replies.

I'm still doing my best to answer everybody. Sometimes I get backlogged, sometimes my E-mail crashes, and sometimes my literature search software crashes. If you've not heard from me in a week, post me again. I send my most challenging questions to the medical student pathology interest group, minus the name, but with your E-mail where you can receive a reply.

Numbers in {curly braces} are from the magnificent Slice of Life videodisk. No medical student should be without access to this wonderful resource. Someday you may be able to access these pictures directly from this page.

I am presently adding clickable links to images in these notes. Let me know about good online sources in addition to these:

Freely have you received, freely give. -- Matthew 10:8. My site receives an enormous amount of traffic, and I'm handling about 200 requests for information weekly, all as a public service.

Pathology's modern founder, Rudolf Virchow M.D., left a legacy of realism and social conscience for the discipline. I am a mainstream Christian, a man of science, and a proponent of common sense and common kindness. I am an outspoken enemy of all the make-believe and bunk that interfere with peoples' health, reasonable freedom, and happiness. I talk and write straight, and without apology.

Throughout these notes, I am speaking only for myself, and not for any employer, organization, or associate.

Special thanks to my friend and colleague, Charles Wheeler M.D., pathologist and former Kansas City mayor. Thanks also to the real Patch Adams M.D., who wrote me encouragement when we were both beginning our unusual medical careers.

If you're a private individual who's enjoyed this site, and want to say, "Thank you, Ed!", then what I'd like best is a contribution to the Episcopalian home for abandoned, neglected, and abused kids in Nevada:

I've spent time there and they are good. Write "Thanks Ed" on your check.

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Especially if you're looking for information on a disease with a name that you know, here are a couple of great places for you to go right now and use Medline, which will allow you to find every relevant current scientific publication. You owe it to yourself to learn to use this invaluable internet resource. Not only will you find some information immediately, but you'll have references to journal articles which you can obtain by interlibrary loan, plus the names of the world's foremost experts and their institutions.

Alternative (complementary) medicine has made real progress since my generally-unfavorable 1983 review linked below. If you are interested in complementary medicine, then I would urge you to visit my new Alternative Medicine page. If you are looking for something on complementary medicine, please go first to the American Association of Naturopathic Physicians. And for your enjoyment... here are some of my old pathology exams for medical school undergraduates.

I cannot examine every claim that my correspondents share with me. Sometimes the independent thinkers prove to be correct, and paradigms shift as a result. You also know that extraordinary claims require extraordinary evidence. When a discovery proves to square with the observable world, scientists make reputations by confirming it, and corporations are soon making profits from it. When a decades-old claim by a "persecuted genius" finds no acceptance from mainstream science, it probably failed some basic experimental tests designed to eliminate self-deception. If you ask me about something like this, I will simply invite you to do some tests yourself, perhaps as a high-school science project. Who knows? Perhaps it'll be you who makes the next great discovery!

Our world is full of people who have found peace, fulfillment, and friendship by suspending their own reasoning and simply accepting a single authority that seems wise and good. I've learned that they leave the movements when, and only when, they discover they have been maliciously deceived. In the meantime, nothing that I can say or do will convince such people that I am a decent human being. I no longer answer my crank mail.

This site is my hobby, and I presently have no sponsor.

This page was last updated February 6, 2006.

During the ten years my site has been online, it's proved to be one of the most popular of all internet sites for undergraduate physician and allied-health education. It is so well-known that I'm not worried about borrowers. I never refuse requests from colleagues for permission to adapt or duplicate it for their own courses... and many do. So, fellow-teachers, help yourselves. Don't sell it for a profit, don't use it for a bad purpose, and at some time in your course, mention me as author and KCUMB as my institution. Drop me a note about your successes. And special thanks to everyone who's helped and encouraged me, and especially the people at KCUMB for making it possible, and my teaching assistants over the years.

Whatever you're looking for on the web, I hope you find it, here or elsewhere. Health and friendship!

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More of Ed's Notes: Ed's Medical Terminology Page

Perspectives on Disease
Cell Injury and Death
Accumulations and Deposits
Inflammation
Fluids
Genes
What is Cancer?
Cancer: Causes and Effects
Immune Injury
Autoimmunity
Other Immune
HIV infections
The Anti-Immunization Activists
Infancy and Childhood
Aging
Infections
Nutrition
Environmental Lung Disease
Violence, Accidents, Poisoning
Heart
Vessels
Respiratory
Red Cells
White Cells
Coagulation
Oral Cavity
GI Tract
Liver
Pancreas (including Diabetes)
Kidney
Bladder
Men
Women
Breast
Pituitary
Thyroid
Adrenal and Thymus
Bones
Joints
Muscles
Skin
Nervous System
Eye
Ear
Autopsy
Lab Profiling
Blood Component Therapy
Serum Proteins
Renal Function Tests
Adrenal Testing
Arthritis Labs
Glucose Testing
Liver Testing
Porphyria
Urinalysis
Spinal Fluid
Lab Problem
Quackery
Alternative Medicine (current)
Alternative Medicine (1983)
Preventing "F"'s: For Teachers!
Medical Dictionary

Courtesy of CancerWEB

Learning Objectives

The student will describe the specificity of the common stains used in histopathology.

The student will correctly define the following terms as used in pathology, supply them (given a definition), and mention their significance:

Given a photomicrograph or glass slide, plus any clinical or special-stain information that may be necessary, the student will recognize:

The student will explain the origins of each of the important tissue pigments (bilirubin, carbon, hemosiderin, lipofuscin, melanin), and recognize each in tissue sections (given appropriate supplementary information when necessary).

The student will recognize the following "hyaline" substances, given the appropriate setting:

The student will recognize why liver cells accumulate fat during alcohol abuse, and list the classic causes of fatty change in the liver and heart respectively.

The student will describe and account for the accumulation of glycogen in cells in patients with diabetes, storage disease, and on IVs.

The student will recognize the major mechanisms of jaundice.

Given a yellow patient, the student will correctly distinguish carotenemia, jaundice, and uremia.

The student will describe typical sites and settings for dystrophic and metastatic calcification, myxoid change, and mitochondrial aberrations.

QUIZBANK

LEARN FIRST

INTRODUCTION

STAINS FOR MEDICAL STUDENTS

Common stains
Eye pathology site

Stains and molecular markers
"Pathology Outlines"
Nat Pernick MD

{10880} congo red stain of amyloid, kidney
{10883} congo red stain of amyloid, polarized

Amyloidosis
Pittsburgh Illustrated Case

{17413} fat stain, atherosclerosis, oil red O
{38782} sudan stain, fatty liver

Liver
Fatty change
Dave Barber MD, KCUMB

Fatty liver
Photo and mini-review
Brown U.

Fatty liver
Double normal weight
KU Collection

Fatty liver

KU Collection

    Mucicarmine is a special dye that stains only epithelial mucin (usually red). The actual chemistry remains mysterious.

    Alcian blue stains certain mucoid substances (hyaluronic acid, sulfomucin, maybe carboxymucin depending on the recipe).

    Trichrome uses familiar aniline dyes to stain collagen (type I, also basement membranes) blue or green and everything else some other color. The stain depends on the special way collagen is woven.

    Acid-fast stains (ZN, auramine O, others) stain certain waxes a permanent red (or some other color). This shows up mycobacteria (TB bugs) and certain other rare substances.

    Argentaffin stains test the ability of cell structures to bind and reduce silver, while argyrophil stains demonstrate all sites of silver binding, whether or not reduction occurs. (Everything that is argentaffin is argyrophil, but not vice-versa.)

    Methenamine silver is the most sensitive and specific common stain for fungi and pneumocystis. It stains them black.

    Elastic stains (Verhoeff, Van Gieson) selectively stain elastic fibers (typically black).

    Metachromatic stains take advantage of molecule-stacking. A single dye will impart a variety of hues to different structures. The most important metachromatic dyes are those use to stain blood and bone marrow smears (the various azures); * Bismark brown imparts a metachromatic yellow on pap smears.

    Light green stains RNA green.

    Orange G stains disulfide bonds orange.

    Papanicolaou's stain is used for cytology (i.e., smears of cells on glass slides, "Pap" smears). It contains hematoxylin, eosin, light green, orange G, and sometimes Bismark brown.

    Methyl green pyronine stains RNA red and everything else green.

    Immunostaining (immunofluorescence, immunoperoxidase) uses monoclonal antibodies to demonstrate specific antigens (i.e., specific proteins) in tissues.

      * Immunostaining, and studying how antigens can be lost and recovered, has clarified the mechanism of formalin fixation. Recoverable antigens involve cross-linking of a tyrosine and an amino-sidechain (usually arginine). Am. J. Clin. Path. 121: 190, 2004.

    Nucleic acid probes are now being introduced to stain particular genes and their RNA's. For example, a cancer cell that contains mRNA for albumin must be of hepatocyte origin.

FATTY CHANGE ("fatty metamorphosis", "fatty degeneration", "steatosis"): accumulation of excess neutral fat in vacuoles within non-adipocytes

    If there's one big fat vacuole, it's "macrovesicular". If there's many little fat vacuoles, it's "microvesicular".

    Fatty change of injured cells occurs classically in the liver and the heart.

      There are at least six mechanisms by which the liver cell accumulates fat during disease, any or all of which may be operating in a given situation.

        1. Too much free fat coming to the liver

        2. Too much fatty acid synthesis by the liver

        3. Impaired fatty acid oxidation by the liver

        4. Excess esterification of fatty acid to triglycerides by the liver

        5. Too little apoprotein synthesis by the liver

        6. Failure of lipoprotein secretion by the liver.

      At first the fat accumulates in the rough endoplasmic reticulum, but soon fat globules occur that are not membrane-bound.

      You will care for many patients with fatty liver.

        Fatty liver develops during heavy drinking, and all six mechanisms are known to contribute here.

        Other causes of heavy-duty fatty liver include kwashiorkor (why?), Reye's syndrome, poisoning by phosphorus, carbon tetrachloride, * non-alcoholic steatohepatitis, * outdated tetracycline, pregnancy (rare and mysterious), * the bad kind of galactosemia, and * following ileal bypass for weight reduction.

           If the fat is periportal, think of malnutrition / total parenteral nutrition / AIDS wasting.

{46294} fatty liver in kwashiorkor
{40039} Reye's syndrome, liver; microvesicular fatty change
{40040} Reye's syndrome, liver; microvesicular fatty change; oil red O

        As you'd expect (why?), liver hypoxia from any cause will produce mild fatty change. Also note that both ischemia and toxic injury are worst in the centers of the lobules, since this is where the oxygen supply is poorest (why?)

        * Among the viruses, only hepatitis C produces much fatty change. Nobody knows why.

      After a boozy weekend, a person can have several hundred grams of excess fat in the liver. People dying on benders often have livers weighing more than 4000 gm (normal is 1500 gm or so). These livers hurt (stretched Glisson's capsule), can be palpated below the costal arch, and sections float.

      By itself, the fat is probably harmless enough, but its presence is a marker for injury.

        Patients with fatty livers do occasionally "die of it". A blow to a drinker's abdomen can disrupt enough hepatocytes to cause fatal fat embolization (lung, brain). Or the patient may die of hypoglycemia (not due to the fat, but to the sick liver's not being able to buffer a falling blood glucose.)

    Something clear in an H&E-stained cell? Is it...

    • Sharply-demarcated? Fat (hydrophobic) or mucin (membrane-bound)

    • Blurry borders? Water or glycogen (mix with the hydrophilic cytoplasm)

{08357} fatty liver, gross (we would confirm our impression microscopically)
{08366} fatty liver, micro
{08829} fatty liver, micro
{37589} fatty liver, micro

Fatty liver
Urbana Atlas of Pathology

Fatty liver

WebPath Photo

      Fatty change in the heart is seen in two classic situations, both fortunately rare today:

      (1) It most often reflects poor oxygenation (i.e., chronic severe anemia). It is distributed away from the vessels, and produces a "tiger-stripe" or "thrush-breast" heart.

      (2) The heart damaged by diphtheria exotoxin is uniformly flabby and often fatty. (The old idea that diphtheria toxin block fatty acid burning by inhibiting the carnitine shuttle has been replaced by the finding that the protein is a nonspecific and very potent inhibitor of protein synthesis.).

      Notice that the injured, fat-laden cell may not be permanently damaged or killed. And remember cells can and do die without undergoing fatty changes.

    Accumulation of fat in phagocytic cells is a common theme in pathology. The fat is usually made up largely of cholesterol esters.

      You'll see this in brain necrosis and in xanthomas (hyperlipidemia, "strawberry gallbladder", idiopathic).

      Atherosclerosis, still the #1 disease in our country, results when phagocytic cells in the intimal layers of large arteries become engorged with cholesterol and its esters. The phagocytes themselves tend to die off and leave the cholesterol to crystallize.

        You can recognize cholesterol (esters) in tissue sections by the "needle-shaped" clear spaces left behind when it is removed in processing. (* Cholesterol crystals are really flat rectangles in cross section).

{11051} early atherosclerosis ("fatty streaks", all of you have these already)
{11648} early atherosclerosis, gross (natural-color and "oil red O stain")

Cholesterol emboli
Plugging an artery
KU Collection

      Lipophages are scavenger macrophages that have devoured fat. This is common wherever lipid-rich tissues (belly fat, brain, others) have been injured, or where alveoli cannot drain (surfactant).

        The cytoplasm of these cells typically looks "foamy" ("foam cells", etc.)

{05955} foam cells, wall of gall bladder (these are laden with cholesterol)
{08108} foam cells, wall of gall bladder (ditto)
{01453} microglia (macrophages) eating up necrotic myelin lipid following a stroke

        * Likewise, fixed phagocytes the kidney turn into "foam cells" when sick people pass lipoproteins through their glomerular basement membranes.

        "Tumors" (nodular hyperplasias, really) composed of these cells are called xanthomas ("xanthos" means yellow). These often (but not always) suggest some problem with blood lipids.

{09741} xanthelasma
{38332} eruptive xanthomas
{24886} xanthoma histology (* the thing that looks like a flower is a "floret" giant cell)

Big Xanthoma
Pittsburgh Illustrated Case

Cerebellar xanthomatosis
Rare but great photos
Loyola Med

Juvenile xanthogranuloma
Pittsburgh Pathology Cases

Cholesterol polyps
Gall bladder xanthomas!
Pittsburgh Pathology Cases

    Fatty ingrowth ("stromal infiltration of fat", * "lipomatosis") is totally different from fatty change. It is metaplasia of an organ's capillary pericytes into mature adipocytes.

Fatty ingrowth in heart
Ed Lulo's Pathology Gallery

Fatty ingrowth
Heart
Tom Demark's Site

      This is a common finding in lymph nodes, in the pancreas, and in the right ventricle and atria of the heart. We're seeing it now in the muscles of people on the new anti-HIV medicines. Usually it has no effect on organ function.

      * You probably know that all adipocytes are modified pericytes.

      * I learned to call this "fatty infiltration". Textbooks use "fatty infiltration" as a not-recommended synonym for fatty change.

      * The most important appearance of fatty ingrowth in medical pathology is as a component of most muscular dystrophies. You'll make the diagnosis on other criteria, however.

      * Fatty ingrowth in skeletal muscle is a hallmark of the HIV-insulin resistance syndrome, seen in patients on long-term antiretroviral therapy (J. Clin. Endo. Metab. 89: 2171, 2004.)

GLYCOGEN ACCUMULATION

    Glycogen ordinarily is present in the livers of people in the fed state, and is abundant if the patient has an IV line infusing glucose ("dextrose", "D5", etc.).

    In hyperglycemia, it is common to see glycogen "in" hepatic nuclei (really, in a deep cup-shaped depression in the side of the nucleus; the nucleus looks clear), pancreatic beta cells, and (if control is really poor) in the proximal tubular epithelial cells (why?). These accumulations are probably harmless.

    You'll study glycogen storage diseases later.

{17421} glycogen "in" hepatocyte nuclei
{17422} the real picture of a "glycogen nucleus"
{46306} glycogen in the proximal tubule in poorly-controlled diabetes

    The various glycogen storage diseases result from inborn errors of metabolism.

ACCUMULATIONS OF COMPLEX LIPIDS AND CARBOHYDRATES

    These typically result from inborn errors of metabolism. Typically the substance is stored in lysosomes. Eventually enough accumulates to compromise organ function.

    Now's a good time to memorize what accumulates in what disease:

    • Gaucher's... glucocerebroside

    • Tay-Sachs'... ganglioside

    • Niemann-Pick's... sphingomyelin

    • Hunter's, Hurler's... mucopolysaccharide

    • Fabry's... ceramide trihexose

    Gaucher's disease is common, and produces huge, pink-staining, glucocerebroside-laden, "crumpled tissue paper" (* old-timers say "watered-silk") macrophages in the bone marrow and elsewhere.

    Gaucher cells

    WebPath Photo

    Before we leave the subject of inborn errors of metabolism, remember that in gout, uric acid accumulates in nodules in the tissues. These are called "tophi" (singular "tophus").

    Fabry's disease
    Pittsburgh Illustrated Case

IATROGENIC ACCUMULATIONS

    Lipogranulomas in the spleen and celiac lymph nodes are thought to have several causes, including oral mineral oil.

      * Enjoy reading about "sclerosing lipogranuloma of the penis" in J. Urol. 133: 1046, 1985. One of the great pathology mysteries solved.

    Lymphangiogram contrast medium is an oil that stays in lymph nodes for years.

    Argyria results from silver salts being permanently deposited in the skin (J. Clin. Path. 47: 556, 1994). With improved industry safety standards, the usual cause today is quack medicines. Two faddists make their baby horribly sick: J. Ped. Gastro. 33: 439, 2001.

    Thorium dioxide was, believe it or not, once used to make liver x-rays. It stays around forever, giving off radiation.

PIGMENTS

    Soluble pigments do not appear in tissue sections. They include carotene (carrot gluttons, most yellow on palms and soles, take a history; your lecturer likes his carrots; NEJM 346: 821, 2002), bilirubin (except in bile plugs), and urochrome (kidney failure, check the patient's lab results).

{12216} carotenemia

    Insoluble pigments inside cells are typically stored in phagolysosomes.

    Carbon

      Carbon particles enter our bodies in smoke and soot or as the pigment in jailhouse tattoos (Lancet 338: 380, 1991).

{37887} jailhouse tattoo
{17439} interesting tattoos
{38249} more tattoos
{10943} carbon in macrophages from an excised tattoo

      Carbon settles in macrophages, where it remains indefinitely. Carbon in the lungs and nearby lymph nodes is called "anthracosis". It is inert though ugly. ("If you keep smoking, kid, your lungs will get blacker and blacker!")

      Smoker's Lung
      Most anthracotic lungs are
      MUCH blacker. AFIP

        * Future pathologists: "Blue scars" result from wounds sustained in a coal mine. The dust becomes trapped in the fresh wound for life.

{17438} carbon in the lung, gross
{17437} carbon in the lung, histology
{36157} carbon in macrophages, papanicolaou stain
{26047} carbon in macrophages, papanicolaou stain

Carbon pigment, lung
Mild by today's standards.
WebPath Photo

Carbon pigment

WebPath Photo

      Other mineral dusts include silica (colorless, very harmful) and iron oxide ("rusty lung", not very harmful).

      * NOTE: Professional tattooers use metal salts. Lots of people are allergic to the red mercuric sulfide.

    Lipofuscin (* "lipochrome"; "fuscus" is Latin for brown)

      This is another brown pigment that is now known to be the un-digestible residue of subcellular membranes whose unsaturated lipids have been scrambled ("polymerized", "peroxidated", etc.) by free radicals. (See, for example, Br. J. Surg. 81: 1300, 1994).

        Lipofuscin is the "cellular clinker" or "wear-and-tear pigment". It is considered harmless, and * does not stain with lipid dyes.

          * Well, maybe it's not harmless. Lipofuscin's an important component of the cores of extracellular Alzheimer's lesions (Am. J. Path. 140: 1389, 1992; Am. J. Path. 152: 983, 1998).

        * Not all lipofuscins are clinkers. Even in youth, the interstitial cells of the testis, and the epithelial cells of the epididymis and seminal vesicles are packed with lipofuscin, and there is lipofuscin at the poles of the cardiac nuclei even in babies. And earwax pigment is a lipofuscin.

        "Ceroid" is lipofuscin that has become acid-fast and autofluorescent for some reason. It is of no special significance. (* Future pathologists: the best acid-fast stain for this purpose is the Fite.)

        Hamazaki-Wesenberg bodies are giant lysosomes / residual bodies loaded with lipofuscin. Look for them in lymph nodes especially near sarcoid granulomas. They are a minor mystery of medicine.

{17348} lipofuscin (EM and H&E)

Lipofuscin in the heart
Tom Demark's Site

Lipofuscin
Liver. Trust me.
WebPath Photo

      * The chemistry of lipofuscin formation is just getting worked out. Recipe: Bioch. Biophys. Acta 1290: 319, 1996.

      Lipofuscin becomes more abundant during normal aging, or following atrophy.

        "Brown atrophy" is simply atrophy where the lipofuscin is visible grossly.

{17454} hypertrophy vs. brown atrophy
{18720} hypertrophy vs. brown atrophy

        A good place to find lipofuscin is at the poles of the nuclei of cardiac muscle cells from elderly people. By age 90, the heart may contain 30% lipofuscin by weight.

{17443} lipofuscin (H&E, EM)

        * In other species, the faster the rate of basal metabolism, the faster lipofuscin accumulates (J. Ger. 47: B-126, 1992).

      Melanosis coli pigment is a curious pigment found within macrophages in the mucosa of the colon. This imparts a tortoise-shell appearance to the colons of certain people.

        It is typical of people who like over-the-counter anthraquinone ("cascara", etc.) laxatives. However, this isn't the whole story (Dis. Col. Rect. 32: 235, 1988). The pigment apparently results from apoptosis of the colonic epithelial cells, and they are then digested by those macrophages, with indigestible cell fragments becoming the pigment. You may see it in people with inflammatory bowel syndrome who do not use laxatives (from all the damaged cells, J. Clin. Gastro. 26: 167, 1998). Read all about it: Am. J. Path. 131: 465, 1988.

        Even the chemical nature of melanosis coli pigment remains unknown. It reportedly stains as iron, melanin, and lipofuscin.

Melanosis coli
Great gross photo
Rockford Case of the Month

Melanosis coli
There is also a colon cancer
Urbana Atlas of Pathology

{49202} melanosis coli

    Tobacco pigment is common in alveolar macrophages in heavy smokers. It is a fine, powdery mix of brown pigments, sometimes including iron. Don't confuse it was carbon, which is black.

    Melanin

    Melanoma
    Cancer cell with melanin pigment
    Urbana Atlas of Pathology

      Medical Word Roots From Greek "melos", black. This is the principal pigment of human skin. It is a complex largely polymerized 5,6-dihydroxyindole and other tyrosine metabolites.

      Melanins are widely distributed in the animal kingdom, and the melanin in octopus ink is much like ours. Neuromelanin in the brain is much like skin melanin.

      Natural selection: Races from near the equator are protected from skin cancer and hypervitaminosis D by dark pigmentation. Races from high latitudes are protected from rickets by light pigmentation.

        Dave and Francis Most people make mostly eumelanin, redheads make mostly pheomelanin (this stuff doesn't protect from sunlight but actually generates more free radical when light-exposed). Actually most mammals (including most people) make both; you can tell the granules apart under an electron microscope (eumelanin granules are ellipsoid, pheomelanin granules are spherical). Dark-skinned and most light-skinned make equal amounts of tyrosinase (the rate-limiter), but it works much better in dark-skinned people.

          * Organic chemists: The red is mostly trichochrome c(1a) (J. Org. Chem. 66: 6958, 2001). Trichosiderin, supposedly an iron-rich pigment in red hair, is an artifact from extraction.

        The most important single skin color gene is MC1R, which binds melanocyte-stimulating hormone and which determines both depth of pigment and how much will be pheomelanin (Nat. Genet. 11: 238, 1995, big dosage effect obviously). That this is the origin of most red-headedness is now amply confirmed (J. Inv. Derm. 117: 1314, 2001; Hum. Mol. Genet. 9: 2531, 2000). Most human redheads have zero function at this locus.

        * Cloning the mouse redhead gene perhaps homologous to a rufous albinism (red-hair, red skin in Africans; Nature 361: 72, 1993). People lacking pro-opiomelanocortin also have red hair, along with obesity and congenital hypocortisolism (Hum. Molec. Genet. 11: 1997, 2002; Ann. N.Y. Acad. Sci. 994: 233, 2003).

      Albinos cannot make melanin, and usually have genetic defects of tyrosine metabolism. To think about: Why are children with phenylketonuria more fair-complected than their parents?

Moby Dick, albino whale {53602} albino
{18250} phenylketonuria patient
{18253} phenylketonuria patient

      Melanin is characteristically seen in melanocytes and their tumors (common "moles", malignant melanomas)

        Most (not all) melanomas contain at least a little melanin, and finding melanin production by tumor cells proves a cancer is a melanoma.

        To prove a pigment is melanin, the pathologist applies a little hydrogen peroxide (hair bleach) to the section. If it's melanin, it bleaches. * There's also a Fontana stain, etc.

      Abnormalities of melanin occur in other settings. You will learn them soon enough.

        Diseases with increased ACTH ("MSH" -- think especially of primary adrenocortical insufficiency -- why?) cause hyperpigmentation.

        Suntanning is physiologic (and does not keep out cancer-causing rays). Ingestion or application of psoralens (celery juice, limes, etc.) makes the skin sensitive to sunlight.

        Ferric ion blocks breakdown of melanin, a fact that explains the dark pigmentation in the skin of hemochromatosis patients and over dermatofibromas.

        Melanin in the urine indicates extensive malignant melanoma.

      Tryptophan metabolites provide the yellow color to lipid (adipose tissue, adrenal cortex, tissue necrosis, atherosclerosis; they do not cross the blood-brain barrier, or we'd talk about "yellow matter"). Their importance, if any, is unknown.

    Hemosiderin

      The stainable form of iron is hemosiderin, a complex mixture of proteins and ferric ions. It is faintly visible as shiny golden granules in unstained tissue sections.

        Hemosiderin
        In lung macrophages
        WebPath Photo

        The best way to demonstrate hemosiderin is using acid ferrocyanide, which forms a striking blue complex with stainable ferric ion ("Prussian blue").

        In hepatocytes, hemosiderin tends to locate near the bile canaliculi.

Hemosiderosis of the liver
Prussian blue
WebPath Photo

Iron in kidney tubules
Prussian blue
WebPath Photo

        Note that ferrous iron in heme groups (hemoglobin, myoglobin, cytochromes) does not stain. Neither does the ferric iron stored as ferritin, since the apoferritin protein shields the iron atoms.

      Normally there is some stainable hemosiderin in marrow, spleen, liver.

        Lack of stainable iron of course indicates systemic iron deficiency.

        Localized accumulations of iron ("local hemosiderosis") reflect longstanding congestion (lungs, leg veins), repeated minor injury (shrapnel fragments, sports, etc.).

        Too much iron in the whole body ("generalized hemosiderosis") has several causes that are worth learning now:

        • many red cell transfusions without blood loss
          • (i.e., diseases that ruin red cell precursors)

        • too much iron being absorbed by the gut
          • longstanding hemolysis

          • heavy drinking (any kind of booze; this is very minor compared with the others)

          • hemochromatosis gene (chromosome 6, common)

          • no transferrin in serum (liver becomes loaded, marrow empty: NEJM 326: 1705, 1992)

        • problems using the iron
          • ineffective erythropoiesis (thalassemia, others)

          • "sideroblastic anemia" (inability to put iron into the heme units, stranding it in mitochondria)

          • interleukin 1 effect (blocks uptake of iron by normoblasts, "anemia of chronic disease")

        • gross excess of ferrous iron in the diet
          • "iron supplements"

          • vitamin C abuse (extreme)

          • certain foreign wines (iron is added -- wine-making is a racket in many countries)

          • Bantu beer (brewed in old steel oil drums, infamous; genetics and environment collaborate to cause a serious public health problem: NEJM 326: 95, 1992)

        HemochromatosisExcess hemosiderin eventually causes organ injury by generating free oxygen radicals. This leads to organ failure, called "hemochromatosis". ("Hemochromatosis is generalized hemosiderosis that has made you sick.") This is a major, under-diagnosed, treatable disease in the U.S.

          In a few cases, the disease has been detected by sufferers' tripping airport metal detectors.

          * The oral iron chelators (alpha-ketohydroxypyridines, L1, etc.) were orphan drugs introduced in the early 1990's that have helped people with transfusional hemosiderosis. You'll learn about them soon.

{34364} hemosiderin at site of hemorrhage in a malignant brain tumor
{37592} hemosiderin, Prussian blue stain; there is also black carbon
{38491} hemosiderin-laden macrophages in the lung ("heart failure cells")

Heart Failure Cells
Hemosiderin-laden macrophages in the lung
KU Collection

Hemochromatosis
Liver, H&E stain
KU Collection

Hemochromatosis, liver
Photo and mini-review
Brown U.

Pulmonary macrophages
Mixed pigment -- iron, carbon, tobacco
Dave Barber MD, KCUMB

      A special case of iron deposition is the ferruginous body of asbestosis -- iron-calcium salts encrusted on an asbestos fiber in the lungs.

{36189} ferruginous body in asbestosis

    Copper pigment

      Copper penny and blue copper-salt colors. Deposited in the liver and/or basal ganglia in Wilson's disease, an important diagnosis not to miss.

    Minocycline, an antibiotic, is acted upon by the peroxidases in the thyroid and turns the gland black. For keeps.

    Homogentisic acid polymer ("alkapton"):

      Patients with the hereditary arthritis syndrome "alkaptonuria" accumulate this substance, which breaks down into black pigment, in their cartilages (nose, ears), joints, sweat. The accumulation itself is called "ochronosis". Histopathology: Am. J. Clin. Path. 90: 95, 1988. Genetics: Nat. Gen. 14: 19, 1996.

{18252} ochronosis (black cartilage in the ear)

    Hemozoin: This is a ferric iron pigment that looks like hemosiderin when unstained, but that does not exhibit the Prussian Blue reaction because the iron is sequestered by protein.

      It consists of polymerized heme with each iron atom joined to a carboxyl group on the next porphyrin unit (Proc. Nat. Acad. Sci. 88(2): 325, 1991).

      It is seen in RE cells in malaria; the plasmodia protect themselves from free iron-heme complex by converting it into this substance. Once it's been deposited, it apparently autocatalyzes its own production (Nature 374: 269, 1995). Some of the antimalarials work by preventing the bugs from producing this stuff.

      * Malaria kills as many or more people as AIDS. Almost every one of the deaths could be prevented fairly easily. The ongoing stupidity is a prime example of Virchow's dictum that its overriding public health problem is its politicians. See Br. Med. J. 328: 1033 & 1086 & 1378, 2004; Lancet 363: 237, 2004; lots more.

    Hematin, sometimes deposited in RE cells in other cases of heavy hemolysis, is ferriprotoporphyrin IX hydroxide.

    Bilirubin

{12220} jaundice

Jaundice

WebPath Photo

Jaundice

WebPath Photo

Bile plugs
Cholestasis
WebPath Photo

Kidney, conjugated jaundice
Urbana Atlas of Pathology

      This is the non-iron-containing, yellow-orange pigment that results from breakdown of porphyrin rings (mostly hemoglobin).

      Bilirubin by itself is insoluble in water and is carried on albumin to the liver, where hepatocytes conjugate it with glucuronic acid and pour it into the bile.

      Elevated levels of bilirubin in the blood mean jaundice. Mechanisms:

      • Too many red cells being broken down:
        • all the hemolytic processes (from jogging to sickle cell disease to the intramedullary lysis of normoblasts in thalassemia minor and pernicious anemia; pathologists look for bilirubin gallstones and elevated urinary urobilinogen, why?)

      • Liver cells can't conjugate bilirubin fast enough:
        • most diseases of liver cells

        • just being a newborn ("physiologic jaundice of the newborn")

        • hereditary defects. Most common is Gilbert's non-disease (francophiles say zheeel-BAYRRRR's), a must-know for today's clinicians. Nasty alleles are Crigler-Najjar.

      • Something is blocking bile output:
        • something is blocking the common bile duct (gallstone, pancreatic cancer)

        • patient is taking drugs, typically anabolic steroids (i.e., body-builders)

      You may see bile plugs (bile in distended canaliculi; big ones that ruptured are "bile lakes") or intracellular bilirubin in the liver in obstructive jaundice or primary cancer of hepatocytes.

{24559} liver that is green from biliary obstruction
{39787} bile plug

        Of course, if you find a cancer cell is making bile, you know the cancer arose from a hepatocyte.

      * Trivia: Two proteins, ligandin and protein Z, process bilirubin in the hepatocyte. Phenobarbital increases ligandin and speeds processing of bilirubin. Once it was fashionable to treat everyone with Gilbert's "disease" with phenobarbital, thereby turning healthy adults with a slightly abnormal lab value into chronically and iatrogenically sick adults with a normal lab value.

CALCIFICATION: A subject of interest to most physicians, not just radiologists.

    Calcium salts (hydroxides, phosphate-hydroxides) are deposited. Regardless of cause, calcium salts stain dark blue on H&E. (* If there is any doubt, special stains like the Von Kossa of Alizarin red demonstrate it is calcium.)

    Dystrophic calcification

      This is calcification that takes place locally, in the presence of normal overall calcium-phosphorus metabolism.

        The calcifications may be of any size.

        "Dystrophic" means "seeking out the bad". While a necrotic cell whose mitochondria calcified may provide a nidus for stone-building, some texts suggest that only dead things calcify. This is simply not true.

        * In extracellular calcification, calcium salt is complexed to coagulation factors II, VII, IX, and X, the ones that contain gamma-carboxy glutamic acid (and therefore require vitamin K, etc.)

        In intracellular calcification, the first organelle to calcify is usually the mitochondrion. Of course, that's the end of the cell....

      Several normal structures tend to calcify during adult life.

        This includes the pineal gland, the cartilages in the airways, the media of large arteries ("Monckeberg's") and the mitral valve annulus. These are probably harmless.

        Around 1% of adults develop calcifications in their otherwise-normal sinuses of Valsalva, causing deadly aortic valve stenosis.

{03560} calcified aortic valve, x-ray
{06461} calcified aortic valve, gross
{45702} calcified carotid artery (the proximal portion of the common carotid, and the proximal portions of both internal and external carotid arteries are visible; look carefully!)
{15856} dystrophic calcification in heart muscle (myocarditis patient)

Calcification
From Chile
In Spanish

Calciphylaxis
Wash. U., St. Louis
Illustrated notes

Dystrophic calcification

WebPath Photo

      Little bits of calcium help mammographers recognize breast cancer.

      Breast cancer with microcalcification
      WebPath Photo

      Advanced atherosclerotic plaques undergo calcification, but this is not the principal problem in atherosclerosis.

      Severe atherosclerosis with calcium
      WebPath photo

        * Nobody knows why most dystrophic calcifications happen. One suspect is certain nanobacteria that thrive on the hydroxyapatite surfaces that they build. Tetracycline-sensitive -- let's wait and see. PNAS 95: 7896 & 8274, 1998.

        * "Chelation therapy" (infusions of EDTA) is a perennial health fraud that claims to "cure atherosclerosis by removing calcium from the walls of vessels". Patients feel their fingers tingle during the infusion, and they are told that this is "proof that the circulation was being restored." Explain.

      Dystrophic calcification is characteristic of other diseases as well. The reasons are generally obscure.

        Malformed or damaged cardiac valves tend to calcify, especially congenitally bicuspid aortic valves (another common cause of aortic valve stenosis).

        Caseous granulomas (tuberculosis, histoplasmosis, others) often calcify.

        Scars (surgical, myocardial) often calcify.

        The fingertip pulp calcifies in scleroderma and CREST syndrome.

        Certain tumors contain "psammoma bodies", little spherules of basement membrane that calcify. (Think of thyroid cancer, ovarian cancer, meningioma, somatostatinoma). Little spherical calcifications inside giant cells in granulomas are called "Schaumann bodies" or "conchoid bodies". More about these things later.

{35552} Schaumann bodies in giant cells of granulomas (berylliosis case)

        * Uterine fibroids (smooth muscle tumors) often calcify. (This is an ancient finding: Arch. Path. 107: 91, 1983.)

        * Calcification of the pinna of the ear occurs for some reason in some cases of longstanding adrenocortical insufficiency (Addison's disease; there are other causes too).

        If a fetus dies and calcifies, it may be retained for years as a "lithopedion" ("stone child" -- * read Michael Bishop's famous non-supernatural horror story, "Within the Walls of Tyre").

      A special case of dystrophic calcification is precipitation of calcium stearate in pancreatitis-associated fat necrosis. If the celiac plexus is involved, this produces one of medicine's most intractable pain syndromes.

    Metastatic calcification:

      "Metastatic" means "another place". Here the serum calcium and/or phosphate ion concentration is already elevated for some reason. Healthy tissues calcify.

        * High blood calcium is usually due to cancer destroying bone, high hPTH levels (parathyroid adenomas and hyperplasias, squamous cell carcinoma of the lung, rarely others), sarcoid, vitamin D abuse, milk and antacid abuse.

        High blood phosphate is almost always due to kidney failure or massive tumor lysis.

        * Virchow first explained the mechanism, relating metastatic calcification of lung and stomach to demineralization of the bones and kidney failure.

          * The most grisly example of metastatic calcification is the severe autosomal recessive disease familial tumoral calcinosis. Gene GALNT3: Nat. Genet. 36: 579, 2004.

      Metastatic calcification occurs predictably in the alveolar walls, the gastric fundic epithelium (near parietal cells), the basement membranes of certain renal tubules, and the walls of small blood vessels.

        Note that all but the last are sites of pH gradients. The calcium precipitates first where there is excess hydroxyl ions.

        In very severe lung or kidney involvement, respiratory insufficiency (* "pumice lung") or renal tubular failure can occur. But usually metastatic calcification is harmless evidence of serious disease elsewhere.

        * Future pathologists: A few calcifications around the thin limb of Henle's loop is "normal" and does not imply a calcium problem.

{39670}calcification, metastatic, in the lung;
{08099} calcification, metastatic, in the lung

Metastatic calcification
Lung
WebPath Photo

    * Modern-era pathologists: calcification of collagen is diagnostic of sustained electrical injury (happens at the cathode during electrical torture; J. Clin. Path. 53: 569, 2000; Nature 301: 75, 1983).

    Any kind of calcification can ossify, i.e., produce bone and even bone marrow. (It's commonplace to see bone, with active marrow, in airway sections of elderly patients, in calcified atherosclerotic plaques, and so forth.)

HYALINE: Any substance (intracellular or extracellular) that stains a homogeneous (say "homo-JEAN-yuss") pink on routine H&E stains.

{17485} treatise on hyaline

    When patient are losing lots of protein trough their glomeruli, it's common to see eosinophilic droplets in the proximal tubular epithelial cells. This is a good autopsy marker, especially if the patient was not well worked-up during life.

{46308} hyaline droplets in proximal tubules
{17440} hyaline droplets in proximal tubules

    Russell bodies are round accumulations of monoclonal immunoglobulin that are (or used to be) inside constipated plasma cells. Nobody knows how or why they form.

Russell Body
UHS Case
Photo by Ed

Russell Bodies
Four in one cell
Photo by Ed

    Viral inclusions are crystalloids of virus components within infected cells. The most famous are herpes inclusions -- look in the cell nucleus, since they will give you the diagnosis.

    Mallory's alcoholic hyaline is scrambled prekeratin intermediate filaments plus ubiquitin, typically in liver cells. This usually reflects weeks of heavy drinking ("alcoholic hepatitis" -- * there are other rare causes). The stuff is eosinophilic and flocculent (i.e., it looks like pink cottage cheese).

      Dideoxyinosine therapy for HIV is another cause of Mallory bodies. Am. J. Clin. Path. 108: 280, 1997.

    Mallory's hyaline

    WebPath Photo

{09103} Mallory's alcoholic hyaline, electron micrograph (upper right)
{17418} Mallory's alcoholic hyaline, H&E and electron micrograph

    Alpha-1 protease inhibitor ("antitrypsin") globules look like multi-sized cherries within hepatocytes that are unable to secrete this product (inborn error, regenerating cells).

      * Certain alleles of alpha1-antitrypsin produce globbies in end-stage livers regardless of cause: Am. J. Clin. Path. 107: 692, 1997.

    Alpha-1 antitrypsin globules

    WebPath Photo

    Biotin causes eosinophilic inclusions and optically-clear nuclei in the endometrial glands in pregnancy: Lancet 364: 532, 2004.

    Giant mitochondria, a feature of alcoholic liver disease. If you can spot these, you have exceeded undergraduate pathology expectations. These are called "Yokoo bodies", having been discovered by one of my teachers.

    Collagen can hyalinize, especially in keloids / hypertrophic scars and other abnormal fibrous proliferations.

{17646} keloid, gross
{17647} keloid, histology
{17648} keloid, histology
{46351} keloid, histology

Keloids (hypertrophic scars?)
Actor Benjamin Bratt
UCSF Skin-In-Cinema

Keloid
Glassy fibers
KU Collection

    Excess basement membrane and other proteins "hyalinizes" the body's small arteries in high blood pressure and diabetes.

      Of course this narrows the lumens. * Complement components also bind to the structural components of the vessel, etc., etc.

      Thickening and excesses of basement membrane are a major theme in renal glomerular disease, and in diabetes mellitus. Much more about this later.

{17472} hyaline arteriolar sclerosis (right, one on left is normal)

    Amyloid, mentioned above, is another extracellular accumulation that always has a hyaline appearance.

{13613} amyloid, H&E

Amyloid
From Chile
In Spanish

Amyloid
Congo red
WebPath Photo

    Fibrin, when the meshwork is crunched down, can be intensely eosinophilic and appear "hyaline".

{11427} fibrin in a premature baby's lung ("hyaline membranes")

Hyaline membrane disease
Fibrin membranes in lung
KU Collection

    Fibrin
    On the epicardium
    WebPath Photo

    Fibrinoid is a special "material" seen in the walls of blood vessels that are dead but still contain flowing blood. A mix of plasma proteins and dead cell debris solidifies in the media and stains intensely pink.

      Usually fibrinoid necrosis results from type III immune injury (immune complex precipitation and complement activation). High physical pressure ("malignant hypertension"), toxemia of pregnancy, and some infections can do the same.

Fibrinoid
Damaged vessel, don't know why
WebPath Photo

Fibrinoid
Damaged vessel, don't know why
WebPath Photo

Fibrinoid in an arterial wall
Cornell

Polyarteritis
Urbana Atlas of Pathology

      If solid "hyaline" looks inflamed, it's usually fibrin or "fibrinoid".

      * The centers of rheumatoid nodules may be filled with "fibrinoid", and it is also characteristically seen in the myocardium in rheumatic fever.

      * Radiation injury to vessels appears as hyaline-fibrinoid in vessel walls. Early, there may be some inflammation and/or necrosis. Later, the vessels look more subdued, but the lumen continues to narrow throughout the patient's life-span.

{01917} radiation injury to vessels; the hyaline / fibrinoid is pink

        * Future pathologists only: The Splendore-Hoeppli phenomenon of little pink-staining club-shaped things around actinomyces colonies, fungus masses, schistosome eggs, and occasionally other organic-based "foreign bodies".

        * Future pathologists only: Spironolactone bodies are found in the mineralocorticoid-producing cells of the adrenal gland in people treated with this Rx. They are hyaline, laminated things, up to 15 microns, derived from S.E.R.

    In kidney disease, entire glomeruli "hyalinize". Depending on the disease, these dead glomeruli are replaced by basement membrane-mesangial matrix, collagen, and/or plasma proteins.

MYXOID CHANGE

    Increased ground substance.

      * The comb and wattles of a rooster is the familiar example from normal comparative physiology.

      There is increased ground substance throughout much of the body in hypothyroidism (myxedema).

      * (Curiously) many patients with Graves' disease (which usually produces hyperthyroidism) have localized accumulation of ground substance on their shins ("pretibial myxedema"; it may be severe enough to compress the lymphatics and give superimposed elephantiasis. See Lancet 341: 403, 1993).

    If there is associated damage to the connective tissue fibers, we use the term myxomatous degeneration ("myxoid degeneration").

      The two real-life examples are "cystic medial necrosis" of the aorta (prelude to a lethal tearing called "aortic dissection") and Barlow's floppy mitral valve (a semi-disease that if you really search for it affects a few percent of humankind.)

      * Myxoid change of the intima narrows the renal arteries in scleroderma and Balkan nephropathy, eventually causing kidney failure.

    Accumulation of epithelial mucin, as large pools, may be seen in several diseases, most notably "colloid cancers". More about them later.

ABNORMAL MITOCHONDRIA

    Selective damage of the mitochondria (i.e., extreme swelling seen on electron microscopy) is the essential lesion of true Reye's syndrome.

    Parking-lot crystals inside mitochondria are a hallmark of the genetic diseases of mitochondria, in which a portion of their genetic code is faulty. Abnormal creatine kinase is being synthesized and accumulating.

      * Most of these diseases show up primarily in muscle (why?), and the sick mitochondria accumulating around the edges of the worse-involved fibers create a "ragged red" appearance. More about this later.

    Hürthle cells (oncocytes, Ashkenazy cells, oxyphil cells) have their cytoplasm so packed with mitochondria that there is little room for anything else. You already know these from parathyroid and armpit (apocrine cell) histology. We'll see them at other sites as disease markers.

    Oncocytoma
    Mitochondrion-rich tumor
    VCU Pathology

    Hürthle cell carcinoma
    Thyroid
    Pittsburgh Pathology Cases

    We've already mentioned the giant mitochondria of the alcoholic's liver.

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